rCCA Nutrimouse Case Study

For background information on the rCCA method, refer to the CCA Methods Page.

The R script used for all the analysis in this case study is available here.

More information on Plots

For a more in depth explanation of how to use and interpret the plots seen, refer to the following pages:

• plotIndiv() – Sample Plot
• plotArrow() – Arrow Plot
• plotVar() – Correlation Circle Plot
• network() – Relevance Network Graph
• cim() – Cluster Image Maps

References

1. Martin, P., Guillou, H., Lasserre, F., Déjean, S., Lan, A., Pascussi, J.-M., San Cristobal, M., Legrand, P., Besse, P., and Pineau, T. (2007). Novel aspects of PPARalpha-mediated regulation of lipid and xenobiotic metabolism revealed through a multrigenomic study. Hepatology, 54, 767–777.