MINT

Case Study

For a more in depth breakdown of the functionality and usage of these functions, refer to Case Study: MINT Stem Cells.

Further Reading

The mixOmics MINT methodology has been applied in real research contexts. A few examples can be seen below:

• Poirier S, Déjean, S, Midoux, C, Lê Cao K-A, Chapleur O (2020). Integrating independent microbial studies to build predictive models of anaerobic digestion inhibition by ammonia and phenol. Bioresource Technology 316:123952
• Tian L, Dong X, Freytag S, Lê Cao K-A, Su S, Abadi AJ, Amann-Zalcenstein D, Weber TS, Seidi S, Jabbari JS, Naik S, Ritchie ME (2019). Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments. Nature methods. Jun;16(6):479-487

References

1. Rohart, F., Mason, E. A., Matigian, N., Mosbergen, R., Korn, O., Chen, T., Butcher, S., Patel, J., Atkinson, K., Khosrotehrani, K., Fisk, N. M., Lê Cao, K., and Wells, C. A. (2016). A molecular classification of human mesenchymal stromal cells. PeerJ, 4, e1845.
2. Rohart, F., Eslami, A., Matigian, N. et al. MINT: a multivariate integrative method to identify reproducible molecular signatures across independent experiments and platforms. BMC Bioinformatics 18, 128 (2017). https://doi.org/10.1186/s12859-017-1553-8.