Category Archives: Updates

[open] Self-paced online course Oct 31st – Nov 27 2022

This is our second round of online course ‘mixOmics R Essentials for Biological Data Integration‘ that includes 4 weeks of asynchronous learning (with one live summary + Q&A per week), numerous chats on Slack and an additional 3 weeks to … Continue reading

Posted in News, Updates, Workshop | Tagged | Comments Off on [open] Self-paced online course Oct 31st – Nov 27 2022

Our book is out!

We are excited to announce that our book is out, along with several case studies and R scripts available online. Check out this page. It’s been a very (very) long term project, and a great collaboration with Zoe Welham whose … Continue reading

Posted in News, Publications, Updates | Comments Off on Our book is out!

Webinar: mixOmics in 50 minutes

The webinar was hosted by Australian BioCommons / EMBL-ABR / ARDC  This talk gives an overview of the methods implemented in mixOmics. Topics covered: omics data statistical integration, introduction to matrix factorisation techniques, applications of DIABLO and MINT frameworks for … Continue reading

Posted in News, Updates | Comments Off on Webinar: mixOmics in 50 minutes

We are moving …. to bioC!

Dear all, After 9 years hosted at the R CRAN we are migrating to bioconductor! It’s been a great first journey and we are grateful to the R CRAN for hosting our package. We are now ready for the next … Continue reading

Posted in News, Updates | Tagged , | Comments Off on We are moving …. to bioC!

News 2018, workshops 2018 and DIABLO

Dear all, The first few months of the year have been busy for us. Thanks to your support, we have been ranked second to the Bioinformatics Peer Prize (57 votes, so close after the winner with 59 votes!). Our entry … Continue reading

Posted in News, Updates | Comments Off on News 2018, workshops 2018 and DIABLO

A quick video introduction for mixOmics, vote for us!

Dear mixOmics friends, users, and adventurers, We are reaching out to you to get your unbiased vote 😉 for the Bioinformatics PeerPrize III where we promote our latest publication in PLoS Computational Biology as a software article. For those not … Continue reading

Posted in News, Updates | Comments Off on A quick video introduction for mixOmics, vote for us!

6.3.1 on CRAN: bug fixes and latest news

We pushed 6.3.1 following a major bug in 6.3.0 when dealing with missing values (especially with DIABLO). Another bug related to the one-sided t-test in the tune functions.  All good now. Nipals is also faster to run. A big thank … Continue reading

Posted in News, Updates | Comments Off on 6.3.1 on CRAN: bug fixes and latest news

Version 6.3.0 and workshop

A new CRAN version is now available. We have considerably improved the computational time for the tune and perf functions! (see example below). We also fixed some reproducibility issues when using parallel computing with a set seed. The update of … Continue reading

Posted in Updates, Workshop | Comments Off on Version 6.3.0 and workshop

6.2.0, 2 postdoc positions and workshops

Dear mixOmics users, Our new update 6.2.0 is now available on CRAN as part of our new version of our manuscript. manuscript & package update: The mixOmics manuscript introducing the supervised and integrative frameworks (PLS-DA, DIABLO block.plsda and MINT) has … Continue reading

Posted in News, Updates, Workshop | Tagged , | Comments Off on 6.2.0, 2 postdoc positions and workshops

Update 6.1.3 on CRAN, postdoc position, manuscript and upcoming workshops

Dear mixOmics users, We have been quiet for a while, but we have some good news! A CRAN update, a manuscript in bioRxiv, a 3-year postdoc position open to be part of the mixOmics core team, and three workshops planned … Continue reading

Posted in News, Updates | Tagged , | Comments Off on Update 6.1.3 on CRAN, postdoc position, manuscript and upcoming workshops